INSTRUCTIONS

HELP YOU TO DISCOVER MORE MICROSCOPY APPLICATIONS

Image Analysis Guides
Using NIS Elements

General Analysis 3 (more recent NIS analysis)

Tutorial Recorded on how to use General Analysis 3 module in NIS - this can do 3d auto-segmentation of cells, regions, spots and process files as well (An updated version is coming)

Automated Cell Counting In General Analysis

Step by step General Analysis set up and automated counting.

Co-localisation

Basic automated co-localisation measurements in General Analysis and co-localisation with more advanced criteria.

Deconvolution

How to set up and run deconvolution to enhance image resolution.

FIJI
FIJI Is Just ImageJ ( but with many plugins included )

ImageJ Website

A place to download and learn how to start using FIJI / ImageJ. It is an open source image processing program designed for scientific multidimensional images.

FIJI Tutorials

Links to basic help guides and more advanced tutorials such as "Simple Neurite Tracer: Step By Step Instructions"

FIJI YouTube Channel

Video tutorials

ImageJ/FIJI Macro Programming

Slides from a presentation you can follow to learn how to use Macros in FIJI

ImageJ/FIJI Community Forum

Ask the world wide community for help or search for answers

Tutorial workshop

Watch someone explain how to use FIJI

WORKSHOPS

These are recorded talks from modality specific workshops that we've hosted over the years - We make new ones every so often so ask what we are also planning

Super Resolution Workshop

Confocal Workshop

High Content Imaging Workshop

Light Microscopy Training Workshop